Pre-computed Data
Available Species and Motif Databases
PMET provides pre-computed homotypic motif hits for 21 plant species with multiple transcription factor databases. Using pre-computed data significantly reduces analysis time.
Arabidopsis thaliana
JASPAR Plants 2022PlantTFDBCIS-BP2
Oryza sativa japonica
JASPAR Plants 2022PlantTFDB
Zea mays
JASPAR Plants 2022PlantTFDB
Triticum aestivum
JASPAR Plants 2022
Glycine max
JASPAR Plants 2022
Solanum lycopersicum
JASPAR Plants 2022
Download Full Dataset
The complete pre-computed indexing data can be downloaded from Zenodo:
Download from Zenodo